Protein Information

Protein ZmGATA30
ZmGATA30 is a protein in the C2C2-GATA family.
Information
TF Name:	ZmGATA30
Species:	Maize
TF Family:	C2C2-GATA
Gene Name(Synonym):	GATA30
Uniprot ID:	K7V265

Overview of domains present in v5 transcripts
	PF00320
Zm00001eb196120_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d052431	DAPseq	sequence	fimo	position
Zm00001d052431	DAPseq	sequence	fimo	position
Zm00001d052431	ChIPseq	sequence	fimo	position
Zm00001d052431	PChIPseq	sequence	fimo	position

Zm00001eb196120_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MSNQPPHASLQDDLPDCDGDDPLALAIRLFPAHTTGAGLSPAALGIGRVAEPPRREQEPLANSTYGVRGAGPDPWGLRLS
RSVLGGLDGFDVDTFFADDALDGGGEATEGDSPPAHVTAAARGSLANDDASPLPAAMPAVALEAYDACSAPVPAACGGAP
PVLVANNSMPPASCLGARGALYIVSKRTRTHAPPPLAAESMTPAVAPPPAMPDGGNGGNNRSAALPVALAPPSGSTGGAV
RRRRPVPRPRNREVQRTCSHCQSSKTPQWREGPDGRRTLCNACGLRYKSHRLVPEYRAAESMTPRDLHPNAGLVGASSGP
SSRPSSSSTTTPSQSQIDFPSHALPAVAPPPAMPDPDGGNGGNNRSAALPVALAPPSGSTGGAVRRRRPVPCPRNRQVQR
TCSHCQSSETPQWREGPDGRRTLCNACGLRYRSHRLLPEYRPTTSPSFQIGQHSNRHRRIMQIREQNGTAGS

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00320
PF00320
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Nucleotide Sequence
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TTGAGAAGGAACCAGCAGTCCAGCA...

GRMZM2G464037_T01 from maize genome v3

Related TFome: pUT6548

Amino Acid Sequence
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MSNQPPHASLQDDLPDCDGDDPLALAIRLFPAHTTGAGLSPAALGIGRVAEPPRREQEPLANSTYGVRGAGPDPWGLRLS
RSVLGGLDGFDVDTFFADDALDGGGEATEGDSPPAHVTAAARGSLANDDASPLPAAMPAVALEAYDACSAPVPAACGGAP
PVLVANNSMPPASCLGARGALYIVSKRTRTHAPPPLAAESMTPAVAPPPAMPDGGNGGNNRSAALPVALAPPSGSTGGAV
RRRRPVPRPRNREVQRTCSHCQSSKTPQWREGPDGRRTLCNACGLRYKSHRLVPEYRAAESMTPRDLHPNAGLVGASSGP
SSRPSSSSTTTPSQSQIDFPSHALPAVAPPPAMPDPDGGNGGNNRSAALPVALAPPSGSTGGAVRRRRPVPCPRNRQVQR
TCSHCQSSETPQWREGPDGRRTLCNACGLRYRSHRLLPEYRPTTSPSFQIGQHSNRHRRIMQIREQNGTAGS

Nucleotide Sequence
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ATGAGCAATCAACCACCTCACGCCT...

Zm00001d052431_T001 from maize genome v4

Amino Acid Sequence
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MSNQPPHASLQDDLPDCDGDDPLALAIRLFPAHTTGAGLSPAALGIGRVAEPPRREQEPLANSTYGVRGAGPDPWGLRLS
RSVLGGLDGFDVDTFFADDALDGGGEATEGDSPPAHVTAAARGSLANDDASPLPAAMPAVALEAYDACSAPVPAACGGAP
PVLVANNSMPPASCLGARGALYIVSKRTRTHAPPPLAAESMTPAVAPPPAMPDGGNGGNNRSAALPVALAPPSGSTGGAV
RRRRPVPRPRNREVQRTCSHCQSSKTPQWREGPDGRRTLCNACGLRYKSHRLVPEYRAAESMTPRDLHPNAGLVGASSGP
SSRPSSSSTTTPSQSQIDFPSHALPAVAPPPAMPDPDGGNGGNNRSAALPVALAPPSGSTGGAVRRRRPVPCPRNRQVQR
TCSHCQSSETPQWREGPDGRRTLCNACGLRYRSHRLLPEYRPTTSPSFQIGQHSNRHRRIMQIREQNGTAGS

Nucleotide Sequence
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ATGAGCAATCAACCACCTCACGCCT...

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Protein ZmGATA30

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmGATA30 is the regulator

Interactions where ZmGATA30 is the target
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Zm00001eb196120_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G464037_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d052431_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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